I am assuming that it is a piston type compressor.
The pump function is deignated by it's mechanical configuration. Changing polarity and reversing the rotation of the pump will still result in the same function b/c the duck bill valves open and close by differentials in pressure. When the piston goes down, the pressure drop in the cylinder opens the inlet valve and closes the outlet valve. When the piston goes up, the pressure buid up in the cylinder opens the outlet valve and closes the inlet valve.
The air moved, air leaving the outlet, equals the mass of the air entering the inlet. If you want to get more of a differential pressure at the inlet (vacuum), you need to reduce the opnening of the inlet. This will increase the pressure drop, but also reduce the total mass flow as there will now be a restriction. All this is assuming that it is NOT drawing air from somewhere else. This could be happening as it is easier for the piston rings to seal under pressure than under vacuum. Put a plastic bag with a big piece of foam in it and tape it tight. See what happens. It should compress the foam but it will take it a little while to get all the air out.
Give me more info. I can help. Model and actual pics would help as well as what you will be using for. If you are modifying it for a fiberglass application it has to function really well. What kind of vacuum numbers are you trying to acheive.