Update: I had another look at a couple of f2 Sonnars in which I had previously cleaned the diaphragm (disassembled) with naptha. They didn't look as un-matt as I remember, but greyish rather than black. One had a blade with no matt coating. This had not been obvious when everything was covered with oil, and I thought at the time that the coating had washed off, but in retrospect it is probably more likely it was a replacement uncoated blade.
I gave the diaphragm on the current f1.5 (still assembled to the barrel) three good soakings in isopropanol, and it was looking pretty good, but had a tendency to squeak slightly in operation, so in the end I decided to give it a wash in naptha. This didn't wash off the coating, but it did make it look rather less black than before, and seemed to highlight the wear-marks where the blades had rubbed together, so I guess naptha actually does no harm, but is just a more 'searching' solvent - and it did cure the squeak!
Interesting point: I've noticed that the brass diaphragm operating ring in this lens has two threaded holes for the operating screw, one blade apart. The 'spare' hole looks as though it may be a bit too close to the edge of the ring, so maybe Carl Zeiss decided to salvage a faulty part by drilling and tapping a new hole. You need to make sure you assemble to the correct hole or the diaphragm might be wrecked if you try to set it beyond its operating range.