1.0 mm thickness of the adapter is actually a bit too thick. The correct thickness (as measured from genuine vintage Leitz adapters) is 0.98-0.99 mm. (See tediously pedantic note at the end if you want to know more about this.)
Since a wide-angle lens requires a very short amount of travel to move from infinity to close focus, this alone might be enough to make your lens front-focus on your R-D 1. I'd suggest you try to buy or borrow a genuine Leitz adapter and see if this corrects the problem.
If it turns out that this is the case, then your options are to buy a correct-spec adapter for use with this lens, or to take a bit of thickness off the adapter you already have. Since you need to remove only 0.02 mm at the most, this should be feasible by using abrasive paper to wet-sand material from the front face of the adapter. The way that worked for me was to place the abrasive paper on a flat surface and then rub the adapter against it, changing my grip on the adapter frequently so my hand motions would randomize themselves. Use very fine-grit paper (I used 600) so you're not taking off much material per stroke, and check frequently with your caliper to make sure you are removing it evenly aroundl the circumference of the adapter and that you're not taking off too much. It's a tedious job, so if you can find a genuine Leitz adapter (beware of fakes on eBay!!) at a reasonable price, that's probably a better investment of your time.
If the adapter isn't the problem, you've got a bit more of a head-scratcher. I don't know which version of the Kobalux you have (I believe there were at least three generations) but mine doesn't have any shims behind the rear flange. Also, remember that your problem isn't strictly the spacing distance per se -- it's the
relationship between the position of the lens and the position of the rangefinder coupling cam that moves the coupling arm inside the camera.
On my Kobalux, this relationship is adjustable to some extent by removing the coupling cam (which sits in its own little helical) and repositioning it by one groove to the left or right; this changes the relationship between its movement and the movement of the lens in its focusing mount. Note, though, that it's touchy to disassemble, and if you mess it up (by losing track of the original entry point, for example) it will take hours and hours of trial and error to get it reassembled correctly! So, I suggest you pursue the adapter-thickness option first.
Good luck!
Tediously pedantic end note: Even though the nominal thickness difference between screw and M bodies is indeed 1.0 mm, I believe Leitz deliberately machined its adapters 0.01-0.02 mm thinner to provide clearance for easy installation and removal. If the adapter were machined 1.0 mm thick, the lens would have to be torqued onto it hard enough to eliminate ALL slack; this would put a lot of stress on the body mount and make it difficult to remove the lens from the adapter. I base this belief on what I learned when rebuilding my vintage car's transaxle: The bearings holding the gearshafts in place had to be installed with a specified amount of clearance, then the retaining nuts torqued to a specified setting in order to produce the desired final bearing clearance.)