I have been through all of this as well, twice. I did a lot of testing and in my case I did not find any defective equipment, but I did learn the behaviour of my lens on different cameras. The C-Sonnar is a really fantastic lens, one of my favourites, but I might not feel that way if I did not know that mine is optimal at f1.5 on film, and f2.2 on digital, and in time learn how to compensate for that. What an amazing lens though!
Before you spend big bucks, spend another roll of film on a common sense but controlled test. Here is what worked for me:
1.) Camera on a tripod
2.) Place camera at close focus to a bookshelf at an angle
3.) Focus - and remember (or better write down) the book spine you focus on
4.) Run through the apertures at equivalent exposures
5.) Place the camera/tripod at 2m (but consistent angel) from the bookshelf - repeat
6.) Repeat the above with another lens that you know doesn't have issue
7.) Develop film, print/scan/whatever
8.) Analyse the results
Consider the time and few dollars you spend to do this test as the price of confidence in whatever you do next. If you want to be even more scientific, feel free to measure the distances and angles, have fun with pythagorus, etc., but in my case I as soon as I saw the the prints / scans / jpgs I had a very good feeling for what I was dealing with.
Cheers,
Rob